xiSEARCH
xiSEARCH is a library of routines for peptide-based mass-spectrometry. Most prominently it contains a search-engine for identification of crosslinked peptides.
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Pre-requirements
- Ensure java version 8 (64 bit) is installed on your computer (Note: when downloading with a 32-bit browser an explicit selection of 64-bit download is required).
- For large scale analysis a computer with 16 GB memory is recommended.
- Operating system: Windows (Windows Server 2008 and 2012 and Windows 8 and 10) and Linux (Debian 9, Ubuntu 14.04, Ubuntu 16.04) were tested successfully – but expect that any system running java 8 64 bit should suffice.
How To